BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB031B04SP1|AL429335
(972 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1409 629 e-180
>3x_Contig1409
Length = 9404
Score = 629 bits (317), Expect = e-180
Identities = 317/317 (100%)
Strand = Plus / Plus
Query: 1 atcatcatcatgccggtaaacaagcgcctctgcgttactcatttagtgtggcagatggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9088 atcatcatcatgccggtaaacaagcgcctctgcgttactcatttagtgtggcagatggca 9147
Query: 61 gatgactacttgtttctaccttaaagagcagtatttaacgtaaaaatgagttcaatatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9148 gatgactacttgtttctaccttaaagagcagtatttaacgtaaaaatgagttcaatatcc 9207
Query: 121 tcgctataaagtcttgcattgcgtctttgtgatgatgcagcttaccaaaacaaatgcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9208 tcgctataaagtcttgcattgcgtctttgtgatgatgcagcttaccaaaacaaatgcttt 9267
Query: 181 atttatgcatgtcggtacttacatctaactgtttcttttttttcctcttgtctagtagct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9268 atttatgcatgtcggtacttacatctaactgtttcttttttttcctcttgtctagtagct 9327
Query: 241 gccgcttcacggattctttctgaattgggtgctagtaaagttcccttgttctgtggtaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9328 gccgcttcacggattctttctgaattgggtgctagtaaagttcccttgttctgtggtaga 9387
Query: 301 tcgcttctgatcatata 317
|||||||||||||||||
Sbjct: 9388 tcgcttctgatcatata 9404
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 18,847
Number of Sequences: 1807
Number of extensions: 18847
Number of successful extensions: 142
Number of sequences better than 1.0e-20: 1
length of query: 972
length of database: 10,358,551
effective HSP length: 16
effective length of query: 956
effective length of database: 10,329,639
effective search space: 9875134884
effective search space used: 9875134884
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)